Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp pyrophosphatase | CLV75_3193 | Not Available | Negative | 3217831 - 3218286 | 15780.9 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | CLV75_3194 | Not Available | Negative | 3218313 - 3219509 | 42041.5 |
| putative iron-regulated protein | CLV75_3195 | Not Available | Negative | 3219573 - 3220394 | 29173.7 |
| rna polymerase rpoh-like sigma 32 subunit | CLV75_3196 | Not Available | Negative | 3220391 - 3221269 | 33748.2 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | CLV75_3197 | Not Available | Positive | 3221371 - 3221892 | 18786.8 |
| broad specificity phosphatase phoe | CLV75_3198 | Not Available | Positive | 3221889 - 3222467 | 21317.9 |
| glutathione s-transferase | CLV75_3199 | Not Available | Positive | 3222526 - 3223410 | 32495.9 |
| magnesium chelatase family protein | CLV75_3200 | Not Available | Positive | 3223459 - 3224973 | 52745.4 |
| glutathione synthase | CLV75_3201 | Not Available | Negative | 3224970 - 3225902 | 34710.6 |
| putative endonuclease | CLV75_3202 | Not Available | Negative | 3225964 - 3226332 | 13605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
