Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kap-like p-loop domain-containing protein | CLV75_3163 | Not Available | Positive | 3185238 - 3186524 | 48418.4 |
| atp-binding cassette chvd family protein | CLV75_3164 | Not Available | Positive | 3186613 - 3188280 | 61920.6 |
| hypothetical protein | CLV75_3165 | Not Available | Positive | 3188304 - 3189011 | 27343.5 |
| hypothetical protein | CLV75_3166 | Not Available | Negative | 3189096 - 3189359 | 9788.76 |
| putative cold-shock dna-binding protein | CLV75_3167 | Not Available | Positive | 3189687 - 3189893 | 7343.57 |
| lipoprotein-anchoring transpeptidase erfk/srfk | CLV75_3168 | Not Available | Positive | 3190060 - 3190614 | 20518.7 |
| putative sos response-associated peptidase yedk | CLV75_3169 | Not Available | Negative | 3190611 - 3191225 | 22536.0 |
| acyl-coa thioesterase-1 | CLV75_3170 | Not Available | Negative | 3191235 - 3191894 | 23056.4 |
| putative abc transport system atp-binding protein | CLV75_3171 | Not Available | Positive | 3191925 - 3192620 | 24683.5 |
| putative abc transport system permease protein | CLV75_3172 | Not Available | Positive | 3192617 - 3195145 | 88499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
