Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hint domain-containing protein | CLV75_3103 | Not Available | Positive | 3126365 - 3127285 | 32789.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CLV75_3104 | Not Available | Positive | 3127408 - 3128064 | 24115.1 |
| glutathione s-transferase | CLV75_3105 | Not Available | Positive | 3128123 - 3128788 | 25702.8 |
| epoxyqueuosine reductase | CLV75_3106 | Not Available | Positive | 3128864 - 3129901 | 38062.3 |
| n-methylhydantoinase a/oxoprolinase/acetone carboxylase beta subunit | CLV75_3107 | Not Available | Positive | 3129964 - 3131967 | 70141.2 |
| peptide-methionine (s)-s-oxide reductase | CLV75_3108 | Not Available | Negative | 3131992 - 3132504 | 19352.5 |
| peptide-methionine (r)-s-oxide reductase | CLV75_3109 | Not Available | Negative | 3132501 - 3132950 | 16872.7 |
| eama-like transporter family protein | CLV75_3110 | Not Available | Negative | 3133045 - 3133923 | 30631.9 |
| dna-binding protein hu-beta | CLV75_3111 | Not Available | Negative | 3134035 - 3134322 | 10108.4 |
| amp nucleosidase | CLV75_3112 | Not Available | Negative | 3134453 - 3135916 | 53974.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
