Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | CLV75_3073 | Not Available | Positive | 3089165 - 3091072 | 68515.9 |
| molecular chaperone dnaj | CLV75_3074 | Not Available | Positive | 3091147 - 3092298 | 40657.9 |
| dna repair protein radc | CLV75_3075 | Not Available | Positive | 3092458 - 3093213 | 28308.0 |
| phosphate abc transporter substrate-binding protein (phot family) | CLV75_3076 | Not Available | Negative | 3093217 - 3094773 | 55528.1 |
| hypothetical protein | CLV75_3077 | Not Available | Negative | 3094799 - 3095719 | 32167.8 |
| protein translocase subunit seca | CLV75_3078 | Not Available | Negative | 3095820 - 3098537 | 101143.0 |
| peptidyl-prolyl cis-trans isomerase c | CLV75_3079 | Not Available | Positive | 3098714 - 3099562 | 30523.9 |
| glutamate n-acetyltransferase | CLV75_3080 | Not Available | Positive | 3099568 - 3100794 | 42477.3 |
| 8-oxo-dgtp diphosphatase | CLV75_3081 | Not Available | Positive | 3100791 - 3101189 | 14852.1 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | CLV75_3082 | Not Available | Negative | 3101247 - 3102188 | 35346.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
