Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase-like protein | CLV75_3063 | Not Available | Positive | 3079014 - 3079511 | 18242.8 |
| hypothetical protein | CLV75_3064 | Not Available | Negative | 3079513 - 3080946 | 53944.5 |
| core-2/i-branching enzyme | CLV75_3065 | Not Available | Negative | 3080953 - 3082653 | 64750.4 |
| glycosyl transferase family 2 | CLV75_3066 | Not Available | Negative | 3082650 - 3083636 | 38703.9 |
| glycosyl transferase family 2 | CLV75_3067 | Not Available | Negative | 3083786 - 3084832 | 40092.2 |
| udp-galactose 4-epimerase | CLV75_3068 | Not Available | Negative | 3084829 - 3085812 | 35885.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | CLV75_3069 | Not Available | Negative | 3085809 - 3086609 | 29010.3 |
| 3'(2'),5'-bisphosphate nucleotidase | CLV75_3070 | Not Available | Negative | 3086609 - 3087406 | 28689.6 |
| abc-type polysaccharide/polyol phosphate export permease | CLV75_3071 | Not Available | Positive | 3087530 - 3088351 | 30533.3 |
| alkylated dna repair protein (dna oxidative demethylase) | CLV75_3072 | Not Available | Negative | 3088348 - 3088950 | 22173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
