Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpt domain-containing protein | CLV75_3053 | Not Available | Negative | 3068008 - 3068358 | 12832.1 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | CLV75_3054 | Not Available | Positive | 3068480 - 3069754 | 46975.2 |
| 8-oxo-dgtp diphosphatase | CLV75_3055 | Not Available | Negative | 3069751 - 3070194 | 16757.1 |
| molecular chaperone hsp33 | CLV75_3056 | Not Available | Positive | 3070271 - 3071257 | 35517.7 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | CLV75_3057 | Not Available | Positive | 3071247 - 3071846 | 21710.9 |
| poly(a) polymerase | CLV75_3058 | Not Available | Positive | 3071843 - 3072997 | 41877.9 |
| atp-binding cassette subfamily b multidrug efflux pump | CLV75_3059 | Not Available | Positive | 3073192 - 3075030 | 67504.2 |
| atp-binding cassette subfamily b protein | CLV75_3060 | Not Available | Positive | 3075027 - 3076859 | 65767.8 |
| 23s rrna m(5)u-1939 methyltransferase | CLV75_3061 | Not Available | Positive | 3076899 - 3078122 | 43938.8 |
| voltage-gated sodium channel | CLV75_3062 | Not Available | Positive | 3078145 - 3078930 | 29291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
