Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcription repressor hrca | CLV75_3043 | Not Available | Positive | 3055812 - 3056876 | 38762.3 |
| molecular chaperone grpe | CLV75_3044 | Not Available | Positive | 3056887 - 3057450 | 20784.4 |
| dna mismatch repair protein muts | CLV75_3045 | Not Available | Negative | 3057509 - 3060142 | 95321.0 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | CLV75_3046 | Not Available | Positive | 3060268 - 3062541 | 82037.5 |
| ribokinase | CLV75_3047 | Not Available | Positive | 3062545 - 3063417 | 30621.4 |
| peptide-methionine (s)-s-oxide reductase | CLV75_3048 | Not Available | Negative | 3063414 - 3064085 | 24124.6 |
| putative sterol carrier protein | CLV75_3049 | Not Available | Negative | 3064177 - 3064458 | 9768.97 |
| argininosuccinate synthase | CLV75_3050 | Not Available | Negative | 3064594 - 3065820 | 45298.9 |
| hypothetical protein | CLV75_3051 | Not Available | Positive | 3065960 - 3066727 | 27834.8 |
| l-threonine ammonia-lyase | CLV75_3052 | Not Available | Positive | 3066785 - 3068011 | 44633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
