Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | CLV75_3033 | Not Available | Positive | 3046085 - 3047356 | 47183.8 |
| trna modification gtpase trme | CLV75_3034 | Not Available | Positive | 3047387 - 3048673 | 45495.5 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | CLV75_3035 | Not Available | Positive | 3048686 - 3050554 | 67836.0 |
| 16s rrna (guanine527-n7)-methyltransferase | CLV75_3036 | Not Available | Positive | 3050551 - 3051174 | 23053.8 |
| chromosome partitioning protein | CLV75_3037 | Not Available | Positive | 3051167 - 3051970 | 29199.2 |
| chromosome segregation dna-binding protein | CLV75_3038 | Not Available | Positive | 3051991 - 3052884 | 32479.1 |
| hypothetical protein | CLV75_3039 | Not Available | Negative | 3052874 - 3053227 | 12542.9 |
| oxygen-independent coproporphyrinogen-3 oxidase | CLV75_3040 | Not Available | Negative | 3053231 - 3054385 | 42849.6 |
| xtp/ditp diphosphohydrolase | CLV75_3041 | Not Available | Negative | 3054375 - 3054989 | 22190.2 |
| rnase ph | CLV75_3042 | Not Available | Negative | 3054986 - 3055699 | 25150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
