Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tricarboxylic transport membrane protein | CLV75_2982 | Not Available | Positive | 2998557 - 2999039 | 17824.5 |
| putative tricarboxylic transport membrane protein | CLV75_2983 | Not Available | Positive | 2999041 - 3000552 | 52405.0 |
| formyl-coa transferase | CLV75_2984 | Not Available | Positive | 3000542 - 3001729 | 42294.3 |
| hemy protein | CLV75_2985 | Not Available | Negative | 3001929 - 3003416 | 54265.3 |
| hypothetical protein | CLV75_2986 | Not Available | Negative | 3003427 - 3004725 | 44336.4 |
| uroporphyrinogen-iii synthase | CLV75_2987 | Not Available | Negative | 3004780 - 3005493 | 25713.8 |
| o-sialoglycoprotein endopeptidase | CLV75_2988 | Not Available | Positive | 3005591 - 3006688 | 38080.1 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | CLV75_2989 | Not Available | Positive | 3006685 - 3007647 | 33019.0 |
| hypothetical protein | CLV75_2990 | Not Available | Positive | 3007649 - 3007918 | 9344.28 |
| putative rna-binding protein with pua-like domain | CLV75_2991 | Not Available | Positive | 3007918 - 3008340 | 15961.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
