Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rimj/riml family protein n-acetyltransferase | CLV75_2951 | Not Available | Negative | 2963829 - 2964464 | 23957.4 |
| lipid-a-disaccharide synthase-like uncharacterized protein | CLV75_2952 | Not Available | Negative | 2964636 - 2964935 | 11381.3 |
| glycosyltransferase involved in cell wall biosynthesis | CLV75_2953 | Not Available | Negative | 2964932 - 2965693 | 27420.7 |
| hypothetical protein | CLV75_2954 | Not Available | Positive | 2965811 - 2967301 | 55743.8 |
| hypothetical protein | CLV75_2955 | Not Available | Positive | 2967301 - 2967483 | 6922.66 |
| ion channel | CLV75_2956 | Not Available | Positive | 2967568 - 2967894 | 11784.3 |
| putative purr-regulated permease perm | CLV75_2957 | Not Available | Positive | 2968074 - 2969153 | 37748.9 |
| multidrug resistance efflux pump | CLV75_2958 | Not Available | Positive | 2969150 - 2970214 | 38374.6 |
| protein of unknown function (duf2955) | CLV75_2959 | Not Available | Positive | 2970204 - 2971214 | 35510.9 |
| Trna-arg | Not Available | Not Available | Positive | 2971435 - 2971511 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
