Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_0258 | Not Available | Negative | 251399 - 253324 | 68581.4 |
| hypothetical protein | CLV75_0259 | Not Available | Positive | 253489 - 254184 | 24089.6 |
| rimj/riml family protein n-acetyltransferase | CLV75_0260 | Not Available | Negative | 254186 - 254896 | 26742.5 |
| o-acetylhomoserine sulfhydrylase | CLV75_0261 | Not Available | Negative | 254901 - 256193 | 45846.1 |
| hypothetical protein | CLV75_0262 | Not Available | Negative | 256266 - 257363 | 41559.1 |
| chrr-like anti-ecfsigma factor | CLV75_0263 | Not Available | Positive | 257414 - 258046 | 22781.6 |
| glutamate synthase (nadph/nadh) small chain | CLV75_0264 | Not Available | Positive | 258206 - 259540 | 45926.4 |
| dihydroorotate oxidase b catalytic subunit /dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | CLV75_0265 | Not Available | Positive | 259586 - 260890 | 46827.8 |
| hypothetical protein | CLV75_0266 | Not Available | Positive | 260964 - 261443 | 18038.5 |
| tetr family transcriptional regulator | CLV75_0267 | Not Available | Negative | 261447 - 262055 | 22976.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
