Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_2918 | Not Available | Positive | 2923737 - 2924000 | 9207.38 |
| hypothetical protein | CLV75_2919 | Not Available | Positive | 2924106 - 2924570 | 16227.4 |
| nosr/niri family nitrous oxide reductase transcriptional regulator | CLV75_2920 | Not Available | Positive | 2924561 - 2926738 | 79414.4 |
| nitrous oxide reductase apoprotein | CLV75_2921 | Not Available | Positive | 2926754 - 2928661 | 70339.9 |
| nitrous oxidase accessory protein | CLV75_2922 | Not Available | Positive | 2928665 - 2929921 | 45213.3 |
| cu-processing system atp-binding protein | CLV75_2923 | Not Available | Positive | 2929911 - 2930804 | 31586.2 |
| cu-processing system permease protein | CLV75_2924 | Not Available | Positive | 2930801 - 2931622 | 28338.6 |
| copper chaperone nosl | CLV75_2925 | Not Available | Positive | 2931619 - 2932134 | 18008.6 |
| thiamine biosynthesis lipoprotein | CLV75_2926 | Not Available | Positive | 2932131 - 2933027 | 31382.9 |
| alginate lyase | CLV75_2927 | Not Available | Negative | 2934318 - 2936606 | 87509.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
