Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate/tmao reductase-like tetraheme cytochrome c subunit | CLV75_2908 | Not Available | Positive | 2914402 - 2916192 | 64923.1 |
| plastocyanin | CLV75_2909 | Not Available | Positive | 2916247 - 2916648 | 14916.7 |
| uroporphyrinogen-iii c-methyltransferase | CLV75_2910 | Not Available | Positive | 2916839 - 2917600 | 26917.7 |
| cytochrome c55x | CLV75_2911 | Not Available | Positive | 2917593 - 2917976 | 13427.9 |
| protein nirf | CLV75_2912 | Not Available | Positive | 2917973 - 2919118 | 41770.8 |
| asnc family transcriptional regulator | CLV75_2913 | Not Available | Positive | 2919120 - 2920109 | 36280.6 |
| asnc family transcriptional regulator | CLV75_2914 | Not Available | Positive | 2920106 - 2920555 | 16570.9 |
| asnc family transcriptional regulator | CLV75_2915 | Not Available | Positive | 2920552 - 2921034 | 17703.6 |
| heme d1 biosynthesis radical sam protein nirj | CLV75_2916 | Not Available | Positive | 2921038 - 2922252 | 45070.5 |
| cbb3-type cytochrome c oxidase subunit iii | CLV75_2917 | Not Available | Positive | 2922227 - 2923780 | 57159.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
