Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | CLV75_2888 | Not Available | Positive | 2893519 - 2895447 | 68238.0 |
| periplasmic nitrate reductase maturation protein napf | CLV75_2889 | Not Available | Positive | 2895660 - 2896172 | 18327.7 |
| periplasmic nitrate reductase chaperone napd | CLV75_2890 | Not Available | Positive | 2896169 - 2896441 | 9717.47 |
| periplasmic nitrate reductase subunit napa apoprotein | CLV75_2891 | Not Available | Positive | 2896459 - 2898951 | 93033.7 |
| periplasmic nitrate reductase subunit napg | CLV75_2892 | Not Available | Positive | 2898979 - 2899797 | 28867.7 |
| ferredoxin-type protein naph | CLV75_2893 | Not Available | Positive | 2899794 - 2900705 | 33053.0 |
| periplasmic nitrate reductase subunit napb | CLV75_2894 | Not Available | Positive | 2900718 - 2901152 | 16027.2 |
| cytochrome c-type protein napc | CLV75_2895 | Not Available | Positive | 2901179 - 2901871 | 26274.9 |
| hypothetical protein | CLV75_2896 | Not Available | Positive | 2901884 - 2902141 | 8601.17 |
| crp-like camp-binding protein | CLV75_2897 | Not Available | Negative | 2902169 - 2902960 | 28977.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
