Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyladenosine trna methylthiotransferase mtab | CLV75_2868 | Not Available | Positive | 2876782 - 2878065 | 47569.1 |
| quercetin dioxygenase-like cupin family protein | CLV75_2869 | Not Available | Negative | 2878056 - 2878517 | 17189.2 |
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | CLV75_2870 | Not Available | Negative | 2878647 - 2879435 | 28476.9 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | CLV75_2871 | Not Available | Negative | 2879453 - 2880784 | 50165.7 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CLV75_2872 | Not Available | Negative | 2880799 - 2881383 | 20522.1 |
| cytochrome c | CLV75_2873 | Not Available | Positive | 2881871 - 2882317 | 15958.1 |
| paib family negative transcriptional regulator | CLV75_2874 | Not Available | Negative | 2882330 - 2882950 | 22936.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | CLV75_2875 | Not Available | Positive | 2883225 - 2883665 | 16076.1 |
| chorismate synthase | CLV75_2876 | Not Available | Positive | 2883756 - 2884856 | 39577.1 |
| uncharacterized protein | CLV75_2877 | Not Available | Positive | 2884849 - 2885502 | 23940.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
