Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctm subunit | CLV75_2763 | Not Available | Positive | 2784582 - 2785889 | 46850.5 |
| nucleotide-binding universal stress uspa family protein | CLV75_2764 | Not Available | Positive | 2785903 - 2786313 | 14579.3 |
| toxin ccdb | CLV75_2765 | Not Available | Negative | 2786384 - 2786683 | 10886.4 |
| antitoxin ccda | CLV75_2766 | Not Available | Negative | 2786683 - 2786913 | 8419.97 |
| thiamine transport system substrate-binding protein | CLV75_2767 | Not Available | Positive | 2787228 - 2788208 | 35021.8 |
| thiamine transport system permease protein | CLV75_2768 | Not Available | Positive | 2788184 - 2789731 | 54497.9 |
| thiamine transport system atp-binding protein | CLV75_2769 | Not Available | Positive | 2789718 - 2790410 | 24813.1 |
| putative molybdenum carrier protein | CLV75_2770 | Not Available | Negative | 2790398 - 2790877 | 17244.6 |
| proline racemase/4-hydroxyproline epimerase | CLV75_2771 | Not Available | Negative | 2790895 - 2791830 | 32781.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CLV75_2772 | Not Available | Negative | 2791821 - 2792780 | 34557.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
