Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctm subunit | CLV75_2742 | Not Available | Negative | 2762114 - 2763406 | 45077.7 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_2743 | Not Available | Negative | 2763406 - 2763948 | 20099.5 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_2744 | Not Available | Negative | 2763956 - 2764966 | 36898.4 |
| lrp/asnc family transcriptional regulator | CLV75_2745 | Not Available | Negative | 2765193 - 2765645 | 17390.1 |
| hypothetical protein | CLV75_2747 | Not Available | Positive | 2766312 - 2767235 | 33526.8 |
| iron complex transport system permease protein | CLV75_2748 | Not Available | Negative | 2767387 - 2768400 | 35122.9 |
| iron complex transport system substrate-binding protein | CLV75_2749 | Not Available | Negative | 2768402 - 2769349 | 34452.0 |
| iron complex transport system atp-binding protein | CLV75_2750 | Not Available | Negative | 2769366 - 2770151 | 28510.7 |
| putative metal-binding protein | CLV75_2751 | Not Available | Negative | 2770148 - 2770504 | 13208.9 |
| hypothetical protein | CLV75_2752 | Not Available | Negative | 2770515 - 2770709 | 7314.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
