Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | CLV75_2732 | Not Available | Positive | 2749604 - 2751115 | 55090.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | CLV75_2733 | Not Available | Positive | 2751158 - 2752009 | 31465.3 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | CLV75_2734 | Not Available | Positive | 2752101 - 2752955 | 31816.7 |
| 2-oxohept-3-enedioate hydratase | CLV75_2735 | Not Available | Positive | 2752952 - 2753752 | 28644.9 |
| 4-hydroxy-2-oxoheptanedioate aldolase | CLV75_2736 | Not Available | Positive | 2753706 - 2754830 | 40783.8 |
| phosphotransacetylase | CLV75_2737 | Not Available | Positive | 2755038 - 2756045 | 34692.6 |
| adenylate cyclase | CLV75_2738 | Not Available | Negative | 2756312 - 2758369 | 74640.3 |
| selenocysteine lyase/cysteine desulfurase | CLV75_2739 | Not Available | Negative | 2758818 - 2760254 | 51652.1 |
| hypothetical protein | CLV75_2740 | Not Available | Negative | 2760446 - 2761642 | 44677.1 |
| putative osmc-like protein | CLV75_2741 | Not Available | Negative | 2761692 - 2762096 | 14488.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
