Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_0238 | Not Available | Negative | 232054 - 232293 | 8728.88 |
| ribosomal large subunit pseudouridine synthase d | CLV75_0239 | Not Available | Positive | 232355 - 233389 | 37222.9 |
| rna polymerase rpoh-like sigma 32 subunit | CLV75_0240 | Not Available | Positive | 233537 - 234433 | 34045.6 |
| putative dehydrogenase | CLV75_0241 | Not Available | Positive | 234564 - 235538 | 35814.6 |
| trar/dksa family transcriptional regulator | CLV75_0242 | Not Available | Positive | 235595 - 235864 | 9813.64 |
| threonine/homoserine efflux transporter rhta | CLV75_0243 | Not Available | Positive | 235880 - 236773 | 32381.2 |
| oligoendopeptidase f | CLV75_0244 | Not Available | Negative | 236796 - 238622 | 68508.0 |
| lysophospholipase | CLV75_0245 | Not Available | Negative | 238702 - 239673 | 35734.7 |
| scp-2 sterol transfer family protein | CLV75_0246 | Not Available | Negative | 239673 - 239963 | 9698.36 |
| tetratricopeptide repeat protein | CLV75_0247 | Not Available | Positive | 239994 - 240602 | 21790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
