Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctm subunit | CLV75_2722 | Not Available | Negative | 2739542 - 2740855 | 47384.8 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_2723 | Not Available | Negative | 2740860 - 2741507 | 23677.9 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_2724 | Not Available | Negative | 2741464 - 2742438 | 34878.0 |
| d-amino-acid dehydrogenase | CLV75_2725 | Not Available | Negative | 2742491 - 2743741 | 44743.0 |
| muconate cycloisomerase | CLV75_2726 | Not Available | Negative | 2743738 - 2744871 | 40647.7 |
| lysr family transcriptional regulator | CLV75_2727 | Not Available | Positive | 2744969 - 2745889 | 34062.9 |
| acetolactate synthase large subunit | CLV75_2728 | Not Available | Negative | 2745850 - 2747544 | 59475.6 |
| gntr family transcriptional regulator | CLV75_2729 | Not Available | Positive | 2747648 - 2748352 | 26531.9 |
| hypothetical protein | CLV75_2730 | Not Available | Positive | 2748349 - 2749062 | 25284.5 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | CLV75_2731 | Not Available | Positive | 2749202 - 2749600 | 14618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
