Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peroxidase-related enzyme | CLV75_2712 | Not Available | Positive | 2726368 - 2726946 | 21369.9 |
| xre family transcriptional regulator | CLV75_2713 | Not Available | Positive | 2726958 - 2727545 | 21578.6 |
| putative mate family efflux protein | CLV75_2714 | Not Available | Positive | 2727558 - 2728946 | 50283.0 |
| d-amino-acid dehydrogenase | CLV75_2715 | Not Available | Negative | 2728927 - 2730165 | 44548.5 |
| delta1-piperideine-2-carboxylate reductase | CLV75_2716 | Not Available | Negative | 2730177 - 2731196 | 35462.2 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_2717 | Not Available | Negative | 2731251 - 2732771 | 55166.4 |
| dimethylglycine dehydrogenase | CLV75_2718 | Not Available | Negative | 2732787 - 2735240 | 91060.4 |
| dna-binding transcriptional lysr family regulator | CLV75_2719 | Not Available | Positive | 2735430 - 2736311 | 32489.7 |
| udp-glucose dehydrogenase | CLV75_2720 | Not Available | Positive | 2736668 - 2737990 | 47192.5 |
| hypothetical protein | CLV75_2721 | Not Available | Negative | 2738603 - 2739535 | 32955.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
