Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | CLV75_2702 | Not Available | Positive | 2717140 - 2717937 | 30191.2 |
| vanillate o-demethylase monooxygenase subunit | CLV75_2703 | Not Available | Negative | 2717973 - 2719022 | 39579.7 |
| lysr family transcriptional regulator | CLV75_2704 | Not Available | Negative | 2719118 - 2720047 | 34104.7 |
| hypothetical protein | CLV75_2705 | Not Available | Positive | 2720143 - 2721228 | 39907.2 |
| fatty acid desaturase | CLV75_2706 | Not Available | Positive | 2721382 - 2722326 | 36904.4 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit/naphthalene 1,2-dioxygenase system ferredoxin subunit | CLV75_2707 | Not Available | Positive | 2722330 - 2722647 | 11694.0 |
| amino acid abc transporter membrane protein 2 (paat family) | CLV75_2708 | Not Available | Negative | 2722655 - 2723536 | 33733.9 |
| amino acid abc transporter substrate-binding protein (paat family) | CLV75_2709 | Not Available | Negative | 2723591 - 2724424 | 30239.6 |
| amino acid abc transporter membrane protein 1 (paat family) | CLV75_2710 | Not Available | Negative | 2724461 - 2725303 | 30997.6 |
| amino acid abc transporter atp-binding protein (paat family) | CLV75_2711 | Not Available | Negative | 2725305 - 2726051 | 28121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
