Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_2692 | Not Available | Positive | 2706798 - 2707430 | 23634.3 |
| hypothetical protein | CLV75_2693 | Not Available | Positive | 2707430 - 2708056 | 22256.5 |
| uncharacterized protein duf1116 | CLV75_2694 | Not Available | Positive | 2708053 - 2709246 | 41692.0 |
| amidase | CLV75_2695 | Not Available | Positive | 2709243 - 2710532 | 46225.6 |
| hypothetical protein | CLV75_2696 | Not Available | Negative | 2710547 - 2711479 | 32311.4 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV75_2697 | Not Available | Negative | 2711560 - 2711973 | 15121.8 |
| sarcosine oxidase subunit gamma | CLV75_2698 | Not Available | Negative | 2711988 - 2712485 | 18357.7 |
| sarcosine oxidase subunit alpha | CLV75_2699 | Not Available | Negative | 2712487 - 2715354 | 104100.0 |
| sarcosine oxidase subunit delta | CLV75_2700 | Not Available | Negative | 2715341 - 2715598 | 9673.2 |
| sarcosine oxidase subunit beta | CLV75_2701 | Not Available | Negative | 2715612 - 2716862 | 45893.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
