Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdpmannose 4,6-dehydratase | CLV75_2652 | Not Available | Negative | 2661250 - 2662374 | 42089.8 |
| dna binding protein with hth domain | CLV75_2653 | Not Available | Negative | 2662469 - 2663551 | 38696.5 |
| hypothetical protein | CLV75_2654 | Not Available | Negative | 2663611 - 2664348 | 26126.0 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV75_2655 | Not Available | Negative | 2664345 - 2664869 | 19369.2 |
| polyisoprenoid-binding protein ycei | CLV75_2656 | Not Available | Positive | 2664968 - 2665549 | 20847.8 |
| proline racemase | CLV75_2657 | Not Available | Negative | 2665587 - 2666609 | 36905.8 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_2658 | Not Available | Negative | 2666673 - 2667731 | 38783.9 |
| iclr family transcriptional regulator | CLV75_2659 | Not Available | Negative | 2667728 - 2668522 | 29204.9 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV75_2660 | Not Available | Positive | 2668663 - 2669922 | 46927.7 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV75_2661 | Not Available | Positive | 2670016 - 2670942 | 35346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
