Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit 2 | CLV75_2642 | Not Available | Negative | 2648215 - 2649177 | 35546.3 |
| lytic murein transglycosylase | CLV75_2643 | Not Available | Positive | 2649256 - 2650545 | 47151.2 |
| oligopeptide transport system substrate-binding protein | CLV75_2644 | Not Available | Positive | 2650935 - 2652563 | 60289.2 |
| oligopeptide transport system permease protein | CLV75_2645 | Not Available | Positive | 2652630 - 2653553 | 33816.8 |
| oligopeptide transport system permease protein | CLV75_2646 | Not Available | Positive | 2653565 - 2654494 | 33817.0 |
| peptide/nickel transport system atp-binding protein | CLV75_2647 | Not Available | Positive | 2654496 - 2656301 | 66092.7 |
| utp--glucose-1-phosphate uridylyltransferase | CLV75_2648 | Not Available | Positive | 2656555 - 2657448 | 32229.7 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CLV75_2649 | Not Available | Positive | 2657519 - 2658955 | 52021.0 |
| uncharacterized protein duf2793 | CLV75_2650 | Not Available | Positive | 2659150 - 2660226 | 37274.1 |
| gdp-l-fucose synthase | CLV75_2651 | Not Available | Negative | 2660262 - 2661248 | 36628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
