Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | CLV75_2611 | Not Available | Positive | 2609749 - 2611455 | 62742.6 |
| creatinine amidohydrolase | CLV75_2612 | Not Available | Negative | 2611490 - 2612227 | 26453.5 |
| amino acid abc transporter substrate-binding protein (paat family) | CLV75_2613 | Not Available | Negative | 2612273 - 2613043 | 27921.2 |
| amino acid abc transporter atp-binding protein (paat family) | CLV75_2614 | Not Available | Positive | 2613163 - 2613903 | 27525.3 |
| amino acid abc transporter membrane protein (paat family) | CLV75_2615 | Not Available | Positive | 2613914 - 2614675 | 28390.5 |
| ahpd family alkylhydroperoxidase | CLV75_2616 | Not Available | Positive | 2614687 - 2615037 | 12375.8 |
| phosphonoacetaldehyde dehydrogenase | CLV75_2617 | Not Available | Positive | 2615093 - 2616541 | 52772.5 |
| udp-glucuronate 4-epimerase | CLV75_2618 | Not Available | Positive | 2616669 - 2617682 | 38309.3 |
| atp-binding cassette subfamily c protein | CLV75_2620 | Not Available | Positive | 2618506 - 2620245 | 62683.5 |
| hlyd family secretion protein | CLV75_2621 | Not Available | Positive | 2620242 - 2621552 | 48165.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
