Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | CLV75_2601 | Not Available | Negative | 2595366 - 2597579 | 78772.1 |
| signal transduction histidine kinase | CLV75_2602 | Not Available | Negative | 2597791 - 2598756 | 34554.9 |
| two-component system ompr family response regulator | CLV75_2603 | Not Available | Negative | 2598744 - 2599421 | 24765.1 |
| uncharacterized protein duf4173 | CLV75_2604 | Not Available | Negative | 2599399 - 2600865 | 54356.7 |
| uncharacterized protein | CLV75_2605 | Not Available | Positive | 2601035 - 2603341 | 83533.0 |
| peptide/nickel transport system substrate-binding protein | CLV75_2606 | Not Available | Positive | 2603551 - 2605131 | 57710.8 |
| peptide/nickel transport system substrate-binding protein | CLV75_2607 | Not Available | Positive | 2605281 - 2606846 | 57500.7 |
| putative glutathione s-transferase | CLV75_2608 | Not Available | Positive | 2606859 - 2607794 | 34882.4 |
| peptide/nickel transport system permease protein | CLV75_2609 | Not Available | Positive | 2607820 - 2608797 | 35972.3 |
| peptide/nickel transport system permease protein | CLV75_2610 | Not Available | Positive | 2608794 - 2609744 | 34288.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
