Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-threo-aldose 1-dehydrogenase | CLV75_2521 | Not Available | Positive | 2511643 - 2512668 | 37488.4 |
| l-fuconolactonase | CLV75_2522 | Not Available | Positive | 2512672 - 2513505 | 30754.6 |
| xre family transcriptional regulator | CLV75_2523 | Not Available | Negative | 2513659 - 2514306 | 23972.6 |
| arac family transcriptional regulator with amidase-like domain | CLV75_2524 | Not Available | Positive | 2514445 - 2515449 | 36274.5 |
| sarcosine oxidase subunit gamma | CLV75_2525 | Not Available | Negative | 2515458 - 2516018 | 19634.2 |
| sarcosine oxidase subunit alpha | CLV75_2526 | Not Available | Negative | 2516011 - 2518956 | 106791.0 |
| sarcosine oxidase subunit delta | CLV75_2527 | Not Available | Negative | 2518953 - 2519240 | 10955.8 |
| n-methylglutamate dehydrogenase subunit a precursor | CLV75_2528 | Not Available | Negative | 2519252 - 2520502 | 45509.5 |
| zinc transport system permease protein | CLV75_2529 | Not Available | Negative | 2520710 - 2521516 | 27907.0 |
| zinc transport system atp-binding protein | CLV75_2530 | Not Available | Negative | 2521516 - 2522256 | 26535.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
