Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_2511 | Not Available | Negative | 2502994 - 2503353 | 12616.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | CLV75_2512 | Not Available | Negative | 2503371 - 2504213 | 30211.8 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | CLV75_2513 | Not Available | Negative | 2504231 - 2504986 | 26282.5 |
| l-rhamnose mutarotase | CLV75_2514 | Not Available | Negative | 2504990 - 2505319 | 13052.5 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | CLV75_2515 | Not Available | Negative | 2505334 - 2506446 | 40227.5 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_2516 | Not Available | Negative | 2506448 - 2507545 | 40009.4 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | CLV75_2517 | Not Available | Negative | 2507550 - 2508413 | 31569.3 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV75_2518 | Not Available | Negative | 2508417 - 2509307 | 33519.1 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV75_2519 | Not Available | Negative | 2509377 - 2510696 | 47050.4 |
| iclr family transcriptional regulator | CLV75_2520 | Not Available | Positive | 2510825 - 2511646 | 30194.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
