Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_2489 | Not Available | Negative | 2477293 - 2478468 | 43839.4 |
| hypothetical protein | CLV75_2490 | Not Available | Negative | 2478465 - 2479517 | 38121.0 |
| sugar phosphate isomerase/epimerase | CLV75_2491 | Not Available | Negative | 2479514 - 2480356 | 30000.7 |
| nad-dependent epimerase/dehydratase family protein | CLV75_2492 | Not Available | Negative | 2480360 - 2481325 | 35305.1 |
| hypothetical protein | CLV75_2493 | Not Available | Positive | 2481428 - 2481583 | 5581.62 |
| hypothetical protein | CLV75_2494 | Not Available | Positive | 2481741 - 2481977 | 8577.3 |
| type ii secretion system protein a | CLV75_2495 | Not Available | Positive | 2482165 - 2483091 | 34516.2 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | CLV75_2496 | Not Available | Positive | 2483088 - 2484644 | 57761.3 |
| capsular exopolysaccharide synthesis family protein | CLV75_2497 | Not Available | Positive | 2484660 - 2485496 | 31521.6 |
| exopolysaccharide biosynthesis wecb/taga/cpsf family protein | CLV75_2498 | Not Available | Negative | 2485562 - 2486353 | 28705.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
