Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | CLV75_2459 | Not Available | Positive | 2436121 - 2437125 | 36059.7 |
| glycosyltransferase involved in cell wall biosynthesis | CLV75_2460 | Not Available | Positive | 2437122 - 2438363 | 45477.9 |
| gt2 family glycosyltransferase | CLV75_2461 | Not Available | Positive | 2438353 - 2439342 | 36128.7 |
| putative dehydrogenase | CLV75_2462 | Not Available | Positive | 2439363 - 2441471 | 76758.8 |
| o-antigen/teichoic acid export membrane protein | CLV75_2463 | Not Available | Positive | 2441505 - 2442905 | 51803.7 |
| udp-galactose 4-epimerase | CLV75_2464 | Not Available | Negative | 2442952 - 2443953 | 35777.1 |
| hypothetical protein | CLV75_2465 | Not Available | Positive | 2444165 - 2444311 | 5604.83 |
| glycosyltransferase involved in cell wall biosynthesis | CLV75_2466 | Not Available | Positive | 2444304 - 2445533 | 45307.2 |
| protoporphyrinogen oxidase | CLV75_2467 | Not Available | Positive | 2445585 - 2446841 | 47494.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | CLV75_2468 | Not Available | Negative | 2446888 - 2447661 | 27667.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
