Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CLV75_2426 | Not Available | Positive | 2402572 - 2402850 | 10735.3 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | CLV75_2428 | Not Available | Negative | 2403932 - 2405449 | 53940.3 |
| hypothetical protein | CLV75_2429 | Not Available | Negative | 2405484 - 2405828 | 12955.5 |
| hypothetical protein | CLV75_2430 | Not Available | Negative | 2405825 - 2406190 | 13519.7 |
| mgt family glycosyltransferase | CLV75_2431 | Not Available | Negative | 2406187 - 2407473 | 48031.8 |
| putrescine transport system atp-binding protein | CLV75_2432 | Not Available | Negative | 2407498 - 2408559 | 38643.7 |
| spermidine/putrescine transport system permease protein | CLV75_2433 | Not Available | Negative | 2408556 - 2409338 | 28564.7 |
| spermidine/putrescine transport system permease protein | CLV75_2434 | Not Available | Negative | 2409338 - 2410192 | 31306.9 |
| spermidine/putrescine transport system substrate-binding protein | CLV75_2435 | Not Available | Negative | 2410271 - 2411341 | 38364.2 |
| dna-binding gntr family transcriptional regulator | CLV75_2436 | Not Available | Positive | 2411520 - 2412443 | 34074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
