Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin a secretion protein hlyd | CLV75_2415 | Not Available | Positive | 2389063 - 2390172 | 39516.4 |
| putative abc transport system atp-binding protein | CLV75_2416 | Not Available | Positive | 2390202 - 2390888 | 24447.3 |
| putative abc transport system permease protein | CLV75_2417 | Not Available | Positive | 2390888 - 2392291 | 49893.8 |
| hypothetical protein | CLV75_2418 | Not Available | Positive | 2392310 - 2392963 | 24591.4 |
| class 3 adenylate cyclase | CLV75_2419 | Not Available | Positive | 2393581 - 2394552 | 35596.0 |
| pimeloyl-acp methyl ester carboxylesterase | CLV75_2420 | Not Available | Negative | 2395053 - 2395937 | 33007.3 |
| pimeloyl-acp methyl ester carboxylesterase | CLV75_2421 | Not Available | Positive | 2396221 - 2397066 | 30907.0 |
| putative membrane protein | CLV75_2422 | Not Available | Negative | 2397246 - 2397833 | 22334.6 |
| murein l,d-transpeptidase ycbb/ykud | CLV75_2424 | Not Available | Positive | 2399572 - 2401200 | 60915.2 |
| putative n-acetyltransferase yhbs | CLV75_2425 | Not Available | Negative | 2401743 - 2402228 | 18299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
