Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di/tricarboxylate transporter | CLV75_2404 | Not Available | Positive | 2376693 - 2378492 | 62109.7 |
| sodium/proton antiporter (nhaa family) | CLV75_2405 | Not Available | Negative | 2378489 - 2379844 | 47512.8 |
| methyltransferase family protein | CLV75_2406 | Not Available | Negative | 2380196 - 2380546 | 13311.9 |
| dna invertase pin-like site-specific dna recombinase | CLV75_2407 | Not Available | Negative | 2380613 - 2381164 | 20210.4 |
| tnpa family transposase | CLV75_2408 | Not Available | Negative | 2381295 - 2384186 | 108844.0 |
| dde superfamily endonuclease | CLV75_2409 | Not Available | Negative | 2384226 - 2384777 | 20868.3 |
| hypothetical protein | CLV75_2411 | Not Available | Positive | 2385138 - 2385389 | 9353.26 |
| tfp pilus assembly protein pilf | CLV75_2412 | Not Available | Negative | 2385743 - 2387068 | 48477.1 |
| hypothetical protein | CLV75_2413 | Not Available | Positive | 2387213 - 2387521 | 11555.8 |
| ribonuclease bn (trna processing enzyme) | CLV75_2414 | Not Available | Positive | 2387526 - 2388980 | 54539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
