Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_2336 | Not Available | Positive | 2317286 - 2318335 | 38012.3 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_2337 | Not Available | Positive | 2318337 - 2319413 | 39555.4 |
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV75_2338 | Not Available | Positive | 2319410 - 2320273 | 32398.4 |
| carbohydrate abc transporter membrane protein 2 (cut1 family) | CLV75_2339 | Not Available | Positive | 2320270 - 2321067 | 29922.1 |
| putative small integral membrane protein | CLV75_2340 | Not Available | Positive | 2321076 - 2321477 | 14812.3 |
| putative transcriptional regulator | CLV75_2341 | Not Available | Positive | 2321525 - 2321938 | 15737.8 |
| blar1 peptidase m56 | CLV75_2342 | Not Available | Positive | 2321925 - 2323022 | 40678.4 |
| tripartite atp-independent transporter dctm subunit | CLV75_2344 | Not Available | Negative | 2324510 - 2325910 | 49248.1 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_2345 | Not Available | Negative | 2325922 - 2326554 | 22880.1 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV75_2346 | Not Available | Negative | 2326623 - 2327633 | 36374.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
