Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemoglobin | CLV75_2306 | Not Available | Positive | 2282557 - 2282916 | 12884.3 |
| d-xylose isomerase | CLV75_2307 | Not Available | Negative | 2283931 - 2285238 | 48862.4 |
| monosaccharide abc transporter atp-binding protein (cut2 family) | CLV75_2308 | Not Available | Negative | 2285248 - 2286051 | 28664.5 |
| d-xylose transport system permease protein | CLV75_2309 | Not Available | Negative | 2286051 - 2287349 | 45914.4 |
| xylose-binding protein | CLV75_2310 | Not Available | Negative | 2287413 - 2288432 | 35166.1 |
| putative nbd/hsp70 family sugar kinase | CLV75_2311 | Not Available | Positive | 2288584 - 2289801 | 43639.4 |
| vcbs repeat protein | CLV75_2312 | Not Available | Positive | 2289791 - 2291302 | 54926.8 |
| cytochrome c peroxidase | CLV75_2313 | Not Available | Negative | 2291303 - 2292604 | 46797.8 |
| aldose 1-epimerase | CLV75_2314 | Not Available | Negative | 2292606 - 2293553 | 34676.4 |
| xylulokinase | CLV75_2315 | Not Available | Negative | 2293550 - 2295007 | 52388.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
