Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1 (cut1 family) | CLV75_2295 | Not Available | Negative | 2271464 - 2272492 | 37669.8 |
| carbohydrate abc transporter substrate-binding protein (cut1 family) | CLV75_2296 | Not Available | Negative | 2272558 - 2273784 | 43393.1 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | CLV75_2297 | Not Available | Negative | 2273870 - 2274919 | 38237.7 |
| snoal-like polyketide cyclase | CLV75_2298 | Not Available | Positive | 2275067 - 2276068 | 37701.5 |
| putative tim-barrel fold metal-dependent hydrolase | CLV75_2299 | Not Available | Positive | 2276065 - 2276976 | 33742.9 |
| mosc domain-containing protein yiim | CLV75_2301 | Not Available | Negative | 2278114 - 2278812 | 25615.4 |
| marr family transcriptional regulator | CLV75_2302 | Not Available | Negative | 2278809 - 2279354 | 20095.9 |
| hypothetical protein | CLV75_2303 | Not Available | Positive | 2279441 - 2280190 | 25670.7 |
| peroxiredoxin | CLV75_2304 | Not Available | Positive | 2280249 - 2280773 | 18837.8 |
| catalase | CLV75_2305 | Not Available | Negative | 2280944 - 2282437 | 56189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
