Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mraz protein | CLV75_2204 | Not Available | Positive | 2178014 - 2178517 | 19282.6 |
| 16s rrna (cytosine1402-n4)-methyltransferase | CLV75_2205 | Not Available | Positive | 2178522 - 2179514 | 35996.1 |
| hypothetical protein | CLV75_2206 | Not Available | Positive | 2179511 - 2179879 | 13842.7 |
| cell division protein ftsi (penicillin-binding protein 3) | CLV75_2207 | Not Available | Positive | 2179876 - 2181663 | 64431.7 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | CLV75_2208 | Not Available | Positive | 2181686 - 2183167 | 51762.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | CLV75_2209 | Not Available | Positive | 2183164 - 2184558 | 48445.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | CLV75_2210 | Not Available | Positive | 2184593 - 2185675 | 38927.3 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | CLV75_2211 | Not Available | Positive | 2185826 - 2187220 | 48845.9 |
| hypothetical protein | CLV75_2212 | Not Available | Positive | 2187333 - 2187707 | 12436.8 |
| hypothetical protein | CLV75_2213 | Not Available | Negative | 2187704 - 2188882 | 42772.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
