Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV75_2193 | Not Available | Negative | 2165821 - 2167038 | 44364.7 |
| Trna-gly | Not Available | Not Available | Positive | 2167151 - 2167225 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2167260 - 2167334 | Not Available |
| hypothetical protein | CLV75_2196 | Not Available | Positive | 2167481 - 2167636 | 5573.92 |
| hypothetical protein | CLV75_2197 | Not Available | Negative | 2167652 - 2168035 | 13605.4 |
| pyruvate carboxylase | CLV75_2198 | Not Available | Negative | 2168107 - 2171544 | 126632.0 |
| diguanylate cyclase (ggdef)-like protein | CLV75_2199 | Not Available | Negative | 2171869 - 2173530 | 62275.9 |
| rep family atp-dependent dna helicase | CLV75_2200 | Not Available | Positive | 2173827 - 2176223 | 89545.6 |
| uncharacterized protein (duf1330 family) | CLV75_2201 | Not Available | Negative | 2176227 - 2176517 | 10701.8 |
| uncharacterized protein yjis (duf1127 family) | CLV75_2202 | Not Available | Negative | 2176887 - 2177111 | 8174.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
