Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | CLV75_2143 | Not Available | Negative | 2119071 - 2120084 | 36067.4 |
| aminomethyltransferase | CLV75_2144 | Not Available | Positive | 2120189 - 2122510 | 84506.7 |
| glycine betaine/proline transport system substrate-binding protein | CLV75_2145 | Not Available | Positive | 2122546 - 2123514 | 34999.8 |
| glycine betaine/proline transport system atp-binding protein | CLV75_2146 | Not Available | Positive | 2123531 - 2124628 | 40230.3 |
| glycine betaine/proline transport system permease protein | CLV75_2147 | Not Available | Positive | 2124639 - 2126156 | 54718.6 |
| putative spermidine/putrescine transport system atp-binding protein | CLV75_2148 | Not Available | Negative | 2126575 - 2127639 | 38380.2 |
| spermidine/putrescine transport system permease protein | CLV75_2149 | Not Available | Negative | 2127639 - 2128424 | 28773.7 |
| spermidine/putrescine transport system permease protein | CLV75_2150 | Not Available | Negative | 2128421 - 2129284 | 31492.4 |
| spermidine/putrescine transport system substrate-binding protein | CLV75_2151 | Not Available | Negative | 2129313 - 2130353 | 37560.9 |
| sugar/nucleoside kinase (ribokinase family) | CLV75_2152 | Not Available | Negative | 2130395 - 2131327 | 32622.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
