Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | CLV75_2080 | Not Available | Positive | 2041302 - 2041895 | 21544.7 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_2081 | Not Available | Positive | 2042159 - 2043718 | 56725.4 |
| dimethylglycine dehydrogenase | CLV75_2082 | Not Available | Positive | 2043891 - 2046341 | 89938.8 |
| transcriptional regulator glxa family with amidase domain | CLV75_2083 | Not Available | Positive | 2046356 - 2047354 | 36197.7 |
| hypothetical protein | CLV75_2084 | Not Available | Positive | 2047370 - 2047543 | 6225.35 |
| dimethylsulfoniopropionate lyase dddp | CLV75_2085 | Not Available | Positive | 2047614 - 2048960 | 50032.4 |
| choline/carnitine/betaine transport | CLV75_2086 | Not Available | Positive | 2049047 - 2050708 | 58818.3 |
| glycine betaine/proline transport system substrate-binding protein | CLV75_2087 | Not Available | Positive | 2050737 - 2051693 | 34621.8 |
| hypothetical protein | CLV75_2088 | Not Available | Positive | 2051810 - 2051920 | 3717.62 |
| hypothetical protein | CLV75_2089 | Not Available | Positive | 2051995 - 2052348 | 13295.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
