Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sirohydrochlorin ferrochelatase | CLV75_2050 | Not Available | Negative | 2014771 - 2015457 | 24164.0 |
| hypothetical protein | CLV75_2051 | Not Available | Negative | 2015530 - 2016462 | 33424.6 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | CLV75_2052 | Not Available | Negative | 2016507 - 2017304 | 29209.9 |
| tatd dnase family protein | CLV75_2053 | Not Available | Negative | 2017301 - 2018107 | 29240.5 |
| dna polymerase iii delta prime subunit | CLV75_2054 | Not Available | Negative | 2018104 - 2019225 | 39871.7 |
| thymidylate kinase | CLV75_2055 | Not Available | Negative | 2019233 - 2019859 | 23212.6 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | CLV75_2056 | Not Available | Negative | 2019856 - 2021022 | 41971.6 |
| sporulation related protein | CLV75_2057 | Not Available | Negative | 2021042 - 2022343 | 45523.7 |
| hypothetical protein | CLV75_2058 | Not Available | Negative | 2022286 - 2022489 | 7593.96 |
| Trna-ser | Not Available | Not Available | Positive | 2022548 - 2022637 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
