Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef hand domain-containing protein | CLV75_2040 | Not Available | Positive | 2007001 - 2007456 | 16438.9 |
| rna polymerase sigma-70 factor (ecf subfamily) | CLV75_2041 | Not Available | Positive | 2007463 - 2008077 | 22654.8 |
| hypothetical protein | CLV75_2042 | Not Available | Positive | 2008052 - 2008414 | 13445.6 |
| putative membrane protein | CLV75_2043 | Not Available | Positive | 2008411 - 2008884 | 17350.0 |
| response regulator receiver modulated diguanylate cyclase | CLV75_2044 | Not Available | Negative | 2008889 - 2010289 | 50053.2 |
| uncharacterized protein duf3572 | CLV75_2045 | Not Available | Positive | 2010379 - 2010663 | 10246.2 |
| phosphoglycolate phosphatase | CLV75_2046 | Not Available | Positive | 2010683 - 2011375 | 24290.7 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_2047 | Not Available | Positive | 2011495 - 2013054 | 57553.8 |
| heme-no-binding protein | CLV75_2048 | Not Available | Positive | 2013177 - 2013764 | 21977.2 |
| diguanylate cyclase (ggdef)-like protein | CLV75_2049 | Not Available | Positive | 2013761 - 2014759 | 36392.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
