Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit j | CLV75_2030 | Not Available | Positive | 1996360 - 1996962 | 21951.9 |
| nadh dehydrogenase subunit k | CLV75_2031 | Not Available | Positive | 1996967 - 1997272 | 10937.0 |
| nadh dehydrogenase subunit l | CLV75_2032 | Not Available | Positive | 1997279 - 1999426 | 78577.4 |
| nadh dehydrogenase subunit m | CLV75_2033 | Not Available | Positive | 1999426 - 2000970 | 55921.6 |
| nadh dehydrogenase subunit n | CLV75_2034 | Not Available | Positive | 2000986 - 2002428 | 50976.7 |
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | CLV75_2035 | Not Available | Positive | 2002482 - 2003231 | 26107.9 |
| type iii pantothenate kinase | CLV75_2036 | Not Available | Positive | 2003243 - 2004022 | 28114.6 |
| ribonuclease j | CLV75_2037 | Not Available | Positive | 2004019 - 2005686 | 60107.0 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | CLV75_2038 | Not Available | Negative | 2005683 - 2006384 | 25590.2 |
| uncharacterized protein (duf983 family) | CLV75_2039 | Not Available | Negative | 2006381 - 2006779 | 14703.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
