Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | CLV75_1970 | Not Available | Negative | 1934018 - 1935529 | 55522.1 |
| hypothetical protein | CLV75_1971 | Not Available | Negative | 1935597 - 1936850 | 46056.5 |
| hypothetical protein | CLV75_1972 | Not Available | Negative | 1936977 - 1937405 | 16427.1 |
| aminopeptidase n | CLV75_1973 | Not Available | Negative | 1937402 - 1939954 | 94915.7 |
| malate synthase | CLV75_1974 | Not Available | Positive | 1940160 - 1942295 | 76506.2 |
| uncharacterized protein glcg (duf336 family) | CLV75_1975 | Not Available | Positive | 1942377 - 1942802 | 14432.7 |
| putative glutamine amidotransferase | CLV75_1976 | Not Available | Positive | 1942938 - 1943717 | 28207.3 |
| isoquinoline 1-oxidoreductase beta subunit | CLV75_1977 | Not Available | Negative | 1943757 - 1945997 | 79841.0 |
| isoquinoline 1-oxidoreductase alpha subunit | CLV75_1978 | Not Available | Negative | 1946001 - 1946465 | 16118.1 |
| tetr family transcriptional regulator | CLV75_1979 | Not Available | Positive | 1946565 - 1947143 | 20607.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
