Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite atp-independent transporter dctp family solute receptor | CLV75_1959 | Not Available | Positive | 1924670 - 1925710 | 36889.2 |
| microcystin degradation protein mlrc | CLV75_1960 | Not Available | Positive | 1925799 - 1927265 | 52635.8 |
| d-serine deaminase-like pyridoxal phosphate-dependent protein | CLV75_1961 | Not Available | Positive | 1927262 - 1928317 | 37699.5 |
| 2-dehydro-3-deoxygluconokinase | CLV75_1962 | Not Available | Positive | 1928373 - 1929287 | 32337.1 |
| reactive intermediate/imine deaminase | CLV75_1963 | Not Available | Positive | 1929280 - 1929678 | 14266.0 |
| hypothetical protein | CLV75_1965 | Not Available | Negative | 1930052 - 1930927 | 32746.4 |
| Trna-thr | Not Available | Not Available | Positive | 1931107 - 1931182 | Not Available |
| hypothetical protein | CLV75_1967 | Not Available | Negative | 1931430 - 1931951 | 19778.2 |
| uncharacterized protein duf4177 | CLV75_1968 | Not Available | Negative | 1932097 - 1932528 | 15681.1 |
| peptidase t | CLV75_1969 | Not Available | Negative | 1932627 - 1933865 | 44834.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
