Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr01244 family) | CLV75_1948 | Not Available | Negative | 1917692 - 1918120 | 15359.3 |
| hypothetical protein | CLV75_1949 | Not Available | Negative | 1918130 - 1918561 | 14853.7 |
| hypothetical protein | CLV75_1950 | Not Available | Negative | 1918561 - 1918989 | 14816.8 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | CLV75_1951 | Not Available | Negative | 1919017 - 1919880 | 31490.2 |
| hypothetical protein | CLV75_1952 | Not Available | Positive | 1920123 - 1920338 | 8209.94 |
| hypothetical protein | CLV75_1953 | Not Available | Negative | 1920348 - 1920566 | 7793.01 |
| uncharacterized protein (upf0335 family) | CLV75_1954 | Not Available | Positive | 1920714 - 1920983 | 10329.3 |
| rpir family transcriptional regulator | CLV75_1956 | Not Available | Negative | 1921698 - 1922633 | 33685.9 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV75_1957 | Not Available | Positive | 1922835 - 1923353 | 18815.3 |
| tripartite atp-independent transporter dctm subunit | CLV75_1958 | Not Available | Positive | 1923350 - 1924633 | 45018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
