Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 (hae1) family protein | CLV75_1928 | Not Available | Positive | 1897329 - 1900469 | 111631.0 |
| hypothetical protein | CLV75_1929 | Not Available | Negative | 1900939 - 1901748 | 30134.4 |
| hypothetical protein | CLV75_1930 | Not Available | Negative | 1901989 - 1902201 | 7404.9 |
| putative small secreted protein | CLV75_1931 | Not Available | Negative | 1903578 - 1903715 | 4674.59 |
| arsr family transcriptional regulator | CLV75_1932 | Not Available | Negative | 1903904 - 1904245 | 12820.6 |
| atp-dependent clp protease proteolytic subunit clpp | CLV75_1933 | Not Available | Positive | 1904541 - 1905173 | 23416.1 |
| atp-dependent clp protease atp-binding subunit clpx | CLV75_1934 | Not Available | Positive | 1905309 - 1906574 | 45577.6 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV75_1935 | Not Available | Positive | 1906767 - 1907129 | 13050.6 |
| nadh:ubiquinone oxidoreductase subunit | CLV75_1936 | Not Available | Positive | 1907209 - 1907592 | 14553.7 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | CLV75_1937 | Not Available | Positive | 1907596 - 1908048 | 15173.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
