Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii alpha subunit | CLV75_1908 | Not Available | Positive | 1874068 - 1877568 | 128972.0 |
| ymgg-like glycine-zipper protein | CLV75_1909 | Not Available | Positive | 1877655 - 1877864 | 6608.0 |
| hypothetical protein | CLV75_1910 | Not Available | Positive | 1877867 - 1878238 | 12977.4 |
| slyx protein | CLV75_1911 | Not Available | Negative | 1878243 - 1878437 | 7415.68 |
| histidyl-trna synthetase | CLV75_1912 | Not Available | Positive | 1878563 - 1880050 | 54194.2 |
| atp phosphoribosyltransferase regulatory subunit | CLV75_1913 | Not Available | Positive | 1880054 - 1881142 | 40029.0 |
| atp phosphoribosyltransferase | CLV75_1914 | Not Available | Positive | 1881139 - 1881828 | 25025.8 |
| hypothetical protein | CLV75_1915 | Not Available | Negative | 1881825 - 1882256 | 16437.6 |
| ribonucleoside-diphosphate reductase class ii | CLV75_1916 | Not Available | Positive | 1882371 - 1884653 | 83880.9 |
| helix-turn-helix protein | CLV75_1917 | Not Available | Negative | 1884901 - 1885158 | 9413.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
