Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1851196 - 1851270 | Not Available |
| ferritin | CLV75_1889 | Not Available | Positive | 1851636 - 1852145 | 19110.4 |
| sh3-like domain-containing protein | CLV75_1890 | Not Available | Negative | 1852174 - 1852695 | 19311.1 |
| glyoxylate reductase | CLV75_1891 | Not Available | Positive | 1852832 - 1853818 | 35965.7 |
| d-lactate dehydrogenase (cytochrome) | CLV75_1892 | Not Available | Positive | 1853846 - 1855243 | 49194.7 |
| hypothetical protein | CLV75_1893 | Not Available | Positive | 1855355 - 1856599 | 44789.3 |
| dimethylglycine dehydrogenase | CLV75_1894 | Not Available | Positive | 1856738 - 1859245 | 93585.4 |
| ahpd family alkylhydroperoxidase | CLV75_1895 | Not Available | Negative | 1859314 - 1859649 | 11881.4 |
| uncharacterized protein duf938 | CLV75_1896 | Not Available | Negative | 1859721 - 1860374 | 23366.9 |
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_1897 | Not Available | Negative | 1860371 - 1861510 | 41005.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
